The Realm of Despair
Recently we discovered a paraell universe called the Realm of Despair. It seems that some of the metaverse empires here have an evil or eviler counter part there. We belive that when the Beast was destroyed, lots of powerful dark energy was released and so some of that energy formed together and created the Realm of Despair. Some infected crew members from some of the empires might have caused their molicules to get mixed with the dark energy.
Here's a chart with the empires that have a Realm of Despare counterpart.
Tyranny of Evil and the Raiders=Tyranny of Corruption
Kzinti Empire= WOLF Clan.
Confederation=Terran empire
Autobots=Decepticons.